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Software

Tools

PlanNET

Website | Publication | Code

PlanNET is a web application that stores predicted Schmidtea mediterranea protein-protein interactions (ppi) projected over a Human ppi network

RPGeNet

Website | Publication

Web application to explore the retinitis pigmentosa gene interaction network, built upon 110 RP/LCA driver genes.

SiNoPsis

Website | Publication

This web application is specialized to characterize annotated gene or genomic coordinates (GRCh37/hg19) in terms of Transcription Factor binding sites, histone marks, open-chromatin states, as well as SNPs linkage desequilibrium and eQTL properties.

gff2aplot

Website | Publication

gff2aplot is a program to visualize the alignment of two sequences together with their annotations.

gff2ps

Website | Publication

This web application is specialized to characterize annotated gene or genomic coordinates (GRCh37/hg19) in terms of Transcription Factor binding sites, histone marks, open-chromatin states, as well as SNPs linkage desequilibrium and eQTL properties.

CompGen Main Repository

Github

Website

Computational Genomics Lab code repository.


Page last modified on Tuesday 30 of October, 2018 17:55:58 CET