PhD Theses
Computational methods for the identification of emergent viruses analyzed by high-throughput sequencing in water and food.
Mètodes computacionals per a la identificació de virus emergents analitzats per seqüenciació en massa en aigua i aliments.
PhD Thesis, Universitat de Barcelona, July 27th, 2017.Mètodes computacionals per a la identificació de virus emergents analitzats per seqüenciació en massa en aigua i aliments.
Codirected by J.F. Abril and R. Girones.
Characterizing Neoblasts as Stem Cell Model
Caracterización del Neoblasto como Modelo de Célula Madre
PhD Thesis, Universitat de Barcelona, February 4th, 2016.Caracterización del Neoblasto como Modelo de Célula Madre
Codirected by J.F. Abril and E. Saló.
Comparative Analysis of Eukaryotic Gene Sequence Features
PhD Thesis, Universitat Pompeu Fabra, May 17th, 2005.Directed by R. Guigó
Master Theses
CAPTVRED: An automated pipeline for viral tracking and discovery from capture-based metagenomics samples
MSc in Bioinformatics for Health Sciences, Universitat Pompeu Fabra, July 4th, 2023.
Anàlisis de dades de seqüenciació amb nanopore en Schmidtea mediterranea
MSc in Bioinformatics & Statistics,UOC, June 16th, 2021.
The Development of Atypical Femoral Fracture Gene Network
MSc in Genetics and Genomics, Universitat de Barcelona, September 6th, 2019.
Analysis of a New RPGeNet Dataset
MSc in Genetics and Genomics, Universitat de Barcelona, September 7th, 2018.
Xarxes d’interacció derivades de l’anàlisi automàtica de literatura: gens implicats en càncer colorectal familiar
MSc in Genetics and Genomics, Universitat de Barcelona, September 1st, 2017.
PlanNET: Homology-based predicted interactome for multiple planarian transcriptomes
MSc in Bioinformatics for Health Sciences, Universitat Pompeu Fabra, July 17th, 2017.
K-mer based reduction data approach to improve de-novo transcriptome assembly of Schmidtea mediterranea
MSc in Bioinformatics for Genomics & Drug Design, Universitat Autònoma de Barcelona, September 21st, 2016.
Charting the molecular network of the causative genes for retinal dystrophies
MSc in Biomedicine, Universitat de Barcelona, July 14th, 2014.
Prokaryote genome characterization based on k-mers distribution
MSc in Bioinformatics for Health Sciences, Universitat Pompeu Fabra, September, 2014.
Mapping planarian transcriptome expression levels on metabolic pathways
MSc in Bioinformatics for Genomics & Drug Design, Universitat Autònoma de Barcelona, September, 2013.
Searching for new transcription regulatory motifs in Retinitis pigmentosa related genes
MSc in Bioinformatics for Health Sciences, Universitat Pompeu Fabra, September, 2011.
Improving planarian genome annotation from novel EST sequences
MSc in Genetics and Genomics, Universitat de Barcelona, September, 2010.
EXOBLAMMER: Combining searches by BLAST, HMMER and EXONERATE
MSc in Genetics and Genomics, Universitat de Barcelona, September, 2010.
Outlining snRNA sequences in the human genome
MSc in Bioinformatics for Health Sciences, Universitat Pompeu Fabra, July, 2010.
Undergraduate Theses
Caracterització dels introns a Schmidtea mediterranea amb dades d’ARN-seq i la seva anotació en grafs
BSc in Biology, Universitat de Barcelona, September 12th, 2024
Optimizing a capture kit design for the detection of viral zoonotic species with pandemic potential
BSc in Biomedical Sciences, Universitat de Barcelona, September 4th, 2023
RNA-Seq Datasets Meta-Analysis on Schmidtea mediterranea.
BSc in Biotechnology, Universitat de Barcelona, September 1st, 2022
A new look to splice sites signals: re-modeling models
BSc in Biochemistry, Universitat de Barcelona, September, 2018.
La Part del Tot: Anàlisi de K-mers en seqüències víriques
BSc in Biomedical Sciences, Universitat de Lleida, September, 2016.
Flushing planarian transcriptome dynamics into systems biology networks
BSc in Biology, Universitat de Barcelona, September, 2015.