Data downloader

Download PlanNET sequences and annotations in bulk

Contig identifiers (separated by commas):
Smest Gbrna Dresden Smedgd Consolidated Graveley Pearson Adamidi Illuminaplus Blythe Smed454

Contig Sequences (FASTA) Open Reading Frames (FASTA) Interactions (CSV) Human homologs (CSV) PFAM domains (CSV) Gene Ontologies (CSV)

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Software

Download the software to predict the protein-protein interactions here

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Gene regulatory interactions

Download the gene co-expression network predicted from planarian single-cell experiments at https://github.com/scastlara/PlanExp-protocols

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Website code

The source code of the PlanNET web application is available at https://github.com/scastlara/PlanNET

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