Experiment_dge_table

NetExplorer.views.http_api.planexp.general.experiment_dge_table.do_volcano_plot(expression)

Creates a Volcano plot with a given comparison of conditions.

Parameters

expression (QuerySet of ExpressionRelative) – Relative expression between the two conditions, sorted by absolute fold change.

Returns

Plot with -log(p-value) as y-axis and log fold change as x-axis.

Return type

VolcanoPlot

NetExplorer.views.http_api.planexp.general.experiment_dge_table.experiment_dge_table(request)

Retrieves datasets for which an experiment has data.

Accepts:

  • GET + AJAX

Parameters

  • experiment (str) – Experiment name.

  • condition1 (str) – Condition 1 name.

  • condition2 (str) – Condition 2 name.

  • dataset (str) – Dataset name.

Response:
  • GET + AJAX:

    • str: JSON with DGE table and Volcano Plot.