Computational Genomics Lab | Planarian Proteomics

Planarian Proteomics

Overview

Overview
PRIDE
MASCOT Summary
BLAST2GO Analysis
- BLAST and GO Annotation
- KEGG Pathways

This page summarizes datasets and supplementary material for the manuscript “A proteomics approach to decipher the molecular nature of planarian stem cells”, Fernández-Taboada, et al, BMC Genomics, 2011, 12:133.

PRIDE

Spectra fingerprints were submitted to the PRIDE database. The project accession number is “15541”, the user id “review97055” and the access code “DH6MwwQf”.

MASCOT Summary

First round of spots selection, First Gel (Silver Staining): Control

SPOTS	MS DATA		NCBInr	REFSEQ	URF28M			URF28M_DECOY
a1_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
a2_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
a3_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
a4_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
a5_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
a6_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
a12_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b1_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b3_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b4_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b5_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b6_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b7_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b8_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b9_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b11_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
b12_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
c3_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
c5_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
c6_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
c7_ms_1	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev

Second round of spots selection, First Gel (Silver Staining): Control

SPOTS	MS DATA		NCBInr	REFSEQ	URF28M			URF28M_DECOY
f5_ms_2	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
g5_ms_2	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
g6_ms_2	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
h5_ms_2	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
h6_ms_2	PKL	—-	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev

Second Gel Whole Proteome (DIGE)

SPOTS	MS DATA		NCBInr	REFSEQ	URF28M			URF28M_DECOY
1132	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1174	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1276	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1986	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
2421	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev

Third Gel, Cytosolic Subfraction (DIGE)

SPOTS	MS DATA		NCBInr	REFSEQ	URF28M			URF28M_DECOY
202_1	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
252_2	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
261_3	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
309_5	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
311_6	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
312_7	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
313_8	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
380_9	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
500_10	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
627_11	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
631_12	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
879_16	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1005_17	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1088_18	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1438_19	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev

Fourth Gel, Membrane Subfraction (DIGE)

SPOTS	MS DATA		NCBInr	REFSEQ	URF28M			URF28M_DECOY
132_5	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
243_7	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
276_8	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
726_10	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
780_11	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
809_12	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
816_13	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
823_15	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
831_17	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1012_21	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1021_23	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1030_24	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1133_25	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1144_26	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1145_27	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1154_28	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1156_29	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev

Fifth Gel, Nuclear Subfraction (DIGE)

SPOTS	MS DATA		NCBInr	REFSEQ	URF28M			URF28M_DECOY
393_7	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
397_8	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
402_10	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
407_11	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
438_12	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
530_14	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
534_15	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
537_16	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
538_17	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
561_18	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
563_19	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
579_20	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
600_21	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
682_22	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
802_23	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
808_24	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
811_25	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1200_33	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1232_34	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev
1239_35	PKL	PNG	NCBInr	Refseq	Smed_URF_1	Smed_URF_2	Smed_URF	Smed_URF_1_rev	Smed_URF_2_rev	Smed_URF_rev

BLAST2GO Analysis

BLAST and GO Annotation

DATA	REFSEQ	URF28M
FULL QUERY SEQS	FASTA	FASTA
UNIQUE QUERY SEQS	FASTA	FASTA
FULL TRIMMED SEQS	FASTA	FASTA
UNIQUE TRIMMED SEQS	FASTA	FASTA
CLUSTERED SEQS (75%I)	FASTA	FASTA
BLAST2GO PROJECT	DAT	DAT
KEGG SUMMARY	TBL	TBL

KEGG Pathways

PATHWAY	MAP	REFSEQ		URF28M
PATHWAY	MAP	#ECs/#SEQs	Enzyme Codes	#ECs/#SEQs	Enzyme Codes
Metabolic pathways	GIF	171/297	ec:5.1.1.7 ec:2.7.1.35 ec:5.1.1.3 ec:2.7.1.30 ec:1.1.1.1 ec:4.2.1.3 ec:2.7.7.14 ec:2.7.1.25 ec:2.7.1.23 ec:2.7.1.21 ec:2.6.1.52 ec:2.1.2.11 ec:2.1.2.10 ec:1.11.1.15 ec:2.8.1.8 ec:2.4.2.9 ec:2.4.2.1 ec:3.5.4.26 ec:2.6.1.21 ec:1.2.4.2 ec:6.3.2.6 ec:1.3.99.3 ec:3.5.4.16 ec:1.3.99.2 ec:2.5.1.54 ec:6.3.2.3 ec:5.4.99.2 ec:3.5.4.10 ec:3.1.1.31 ec:2.4.1.83 ec:2.5.1.47 ec:2.7.2.11 ec:2.6.1.1 ec:4.2.1.74 ec:1.5.1.15 ec:2.5.1.29 ec:2.5.1.9 ec:2.5.1.7 ec:2.5.1.3 ec:5.1.3.15 ec:5.1.3.14 ec:2.5.1.1 ec:1.3.1.76 ec:4.2.1.52 ec:2.5.1.19 ec:2.1.2.3 ec:1.10.2.2 ec:2.5.1.10 ec:1.3.3.6 ec:1.3.3.1 ec:6.1.1.17 ec:6.4.1.3 ec:6.4.1.2 ec:4.2.1.47 ec:6.4.1.1 ec:4.2.1.46 ec:1.4.1.21 ec:2.7.4.9 ec:2.7.4.8 ec:2.7.4.7 ec:2.7.4.6 ec:4.2.1.33 ec:2.7.4.3 ec:6.3.5.7 ec:2.3.1.9 ec:4.2.1.24 ec:2.3.1.1 ec:4.2.1.22 ec:4.2.1.20 ec:5.1.3.6 ec:2.3.1.51 ec:2.3.1.50 ec:1.2.1.70 ec:2.4.1.17 ec:3.1.1.4 ec:3.1.1.2 ec:3.1.1.1 ec:4.2.1.17 ec:6.2.1.5 ec:6.2.1.4 ec:4.2.3.4 ec:4.1.1.49 ec:2.3.1.41 ec:2.2.1.6 ec:5.4.2.2 ec:5.4.2.1 ec:2.2.1.1 ec:3.6.1.23 ec:1.3.99.15 ec:1.3.99.13 ec:1.11.1.6 ec:2.3.1.35 ec:3.1.3.25 ec:4.1.1.35 ec:6.3.4.14 ec:4.1.1.33 ec:3.6.1.15 ec:1.2.1.46 ec:1.2.1.41 ec:4.1.1.21 ec:2.4.1.182 ec:2.4.2.21 ec:1.2.1.38 ec:4.99.1.4 ec:2.3.1.16 ec:2.3.1.15 ec:1.1.1.262 ec:1.2.1.36 ec:4.99.1.1 ec:2.3.1.12 ec:4.1.1.15 ec:1.6.5.3 ec:2.4.2.18 ec:1.1.1.63 ec:1.1.1.62 ec:2.7.7.7 ec:2.7.7.6 ec:2.7.7.4 ec:6.3.4.4 ec:4.3.2.1 ec:1.1.1.50 ec:2.1.1.64 ec:5.3.1.16 ec:1.2.1.12 ec:6.3.5.10 ec:1.5.1.2 ec:2.1.1.130 ec:1.1.1.44 ec:1.1.1.42 ec:1.1.1.40 ec:1.1.1.239 ec:1.1.2.3 ec:1.6.99.3 ec:1.1.1.193 ec:1.1.1.39 ec:1.1.1.37 ec:1.14.16.4 ec:1.14.16.2 ec:1.1.1.35 ec:1.14.16.1 ec:5.4.1.2 ec:1.1.1.31 ec:2.1.1.45 ec:4.1.2.13 ec:1.1.1.25 ec:1.1.1.21 ec:2.7.7.60 ec:2.7.1.71 ec:1.1.1.211 ec:5.3.1.6 ec:2.1.1.107 ec:1.3.5.1 ec:2.7.1.69 ec:1.3.1.9 ec:1.1.1.205 ec:4.1.3.39 ec:4.4.1.1 ec:3.6.3.14 ec:2.7.7.48 ec:4.1.3.27 ec:2.1.1.13 ec:2.7.6.1 ec:2.1.1.10 ec:2.7.2.4 ec:2.7.2.3 ec:1.2.1.5 ec:1.2.1.3 ec:2.7.7.38 ec:4.6.1.12 ec:2.7.1.49 ec:1.9.3.1	9/16	ec:2.4.1.17 ec:3.6.3.14 ec:4.2.1.3 ec:2.7.7.12 ec:2.3.3.8 ec:6.2.1.5 ec:6.1.1.17 ec:3.1.1.3 ec:4.2.1.11
Biosynthesis of secondary metabolites	GIF	79/131	ec:5.1.1.7 ec:1.1.1.1 ec:4.2.1.3 ec:2.1.2.11 ec:2.4.2.1 ec:1.2.4.2 ec:6.3.2.6 ec:1.3.99.3 ec:1.3.99.2 ec:2.5.1.54 ec:3.5.4.10 ec:3.1.1.31 ec:2.6.1.1 ec:2.5.1.29 ec:5.1.3.15 ec:2.5.1.1 ec:1.3.1.76 ec:4.2.1.52 ec:2.5.1.19 ec:2.1.2.3 ec:2.5.1.10 ec:6.1.1.17 ec:6.4.1.2 ec:4.2.1.46 ec:2.7.4.6 ec:4.2.1.33 ec:2.7.4.3 ec:2.3.1.9 ec:4.2.1.24 ec:2.3.1.1 ec:4.2.1.20 ec:1.2.1.70 ec:3.1.1.1 ec:4.2.1.17 ec:6.2.1.5 ec:6.2.1.4 ec:4.2.3.4 ec:4.1.1.49 ec:2.2.1.6 ec:5.4.2.2 ec:5.4.2.1 ec:2.2.1.1 ec:2.3.1.35 ec:3.1.3.25 ec:4.1.1.33 ec:4.1.1.21 ec:1.14.13.47 ec:1.2.1.38 ec:4.99.1.4 ec:2.3.1.16 ec:4.99.1.1 ec:2.3.1.12 ec:4.1.1.15 ec:2.4.2.18 ec:4.3.2.1 ec:2.1.1.64 ec:5.3.1.16 ec:1.2.1.12 ec:1.5.1.2 ec:1.1.1.44 ec:1.1.1.42 ec:1.1.1.37 ec:1.1.1.35 ec:4.1.2.13 ec:1.1.1.25 ec:2.7.7.60 ec:2.7.1.71 ec:5.3.1.6 ec:2.1.1.107 ec:1.3.5.1 ec:1.1.1.205 ec:4.1.3.27 ec:2.1.1.13 ec:2.7.6.1 ec:2.1.1.10 ec:2.7.2.4 ec:2.7.2.3 ec:1.2.1.3 ec:4.6.1.12	6/8	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:6.1.1.17 ec:4.1.3.6 ec:4.2.1.11
Microbial metabolism in diverse environments	GIF	45/76	ec:5.1.1.7 ec:1.1.1.1 ec:4.2.1.3 ec:2.7.1.25 ec:2.6.1.52 ec:1.2.4.2 ec:3.1.1.31 ec:3.5.1.4 ec:2.6.1.1 ec:4.2.1.69 ec:5.1.3.15 ec:4.2.1.52 ec:6.4.1.1 ec:2.3.1.9 ec:3.1.1.2 ec:4.2.1.17 ec:6.2.1.5 ec:6.2.1.4 ec:4.1.1.49 ec:5.4.2.2 ec:5.4.2.1 ec:2.2.1.1 ec:1.3.99.15 ec:1.11.1.6 ec:1.2.1.46 ec:2.3.1.16 ec:2.3.1.12 ec:2.7.7.4 ec:1.2.1.12 ec:3.1.8.1 ec:1.1.1.44 ec:1.1.1.42 ec:1.1.1.40 ec:2.3.1.174 ec:1.1.1.39 ec:1.1.1.37 ec:1.1.1.35 ec:4.1.2.13 ec:5.3.1.6 ec:4.1.3.39 ec:2.7.6.1 ec:2.7.2.4 ec:2.7.2.3 ec:1.2.1.5 ec:1.2.1.3	4/6	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:4.2.1.11
Biosynthesis of plant hormones	GIF	42/72	ec:4.2.1.3 ec:1.2.4.2 ec:2.5.1.54 ec:3.5.4.10 ec:3.1.1.31 ec:3.5.1.4 ec:2.6.1.1 ec:2.5.1.29 ec:2.5.1.1 ec:2.5.1.19 ec:2.1.2.3 ec:2.5.1.10 ec:1.3.3.6 ec:4.2.1.20 ec:4.2.1.17 ec:6.2.1.5 ec:6.2.1.4 ec:4.2.3.4 ec:5.4.2.1 ec:2.2.1.1 ec:4.1.1.33 ec:2.3.1.16 ec:2.3.1.12 ec:2.4.2.18 ec:5.3.1.16 ec:1.2.1.12 ec:1.1.1.44 ec:1.1.1.42 ec:1.1.1.37 ec:1.1.1.35 ec:4.1.2.13 ec:1.1.1.25 ec:2.7.7.60 ec:2.7.1.71 ec:1.1.1.211 ec:5.3.1.6 ec:1.3.5.1 ec:4.1.3.27 ec:2.7.6.1 ec:2.7.2.4 ec:2.7.2.3 ec:4.6.1.12	4/6	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:4.2.1.11
Biosynthesis of alkaloids derived from histidine and purine	GIF	26/43	ec:4.2.1.3 ec:2.4.2.1 ec:1.2.4.2 ec:3.5.4.10 ec:3.1.1.31 ec:2.1.2.3 ec:4.2.1.33 ec:6.2.1.5 ec:6.2.1.4 ec:2.2.1.6 ec:5.4.2.1 ec:2.3.1.12 ec:6.3.4.4 ec:5.3.1.16 ec:1.2.1.12 ec:1.1.1.44 ec:1.1.1.42 ec:1.1.1.40 ec:1.1.1.39 ec:1.1.1.37 ec:4.1.2.13 ec:5.3.1.6 ec:1.3.5.1 ec:1.1.1.205 ec:2.7.6.1 ec:2.7.2.3	4/6	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:4.2.1.11
Biosynthesis of alkaloids derived from shikimate pathway	GIF	24/33	ec:4.2.1.3 ec:1.2.4.2 ec:2.5.1.54 ec:2.5.1.19 ec:4.2.1.20 ec:6.2.1.5 ec:6.2.1.4 ec:4.2.3.4 ec:5.4.2.1 ec:2.2.1.1 ec:2.3.1.12 ec:2.4.2.18 ec:1.2.1.12 ec:1.1.1.42 ec:1.1.1.40 ec:1.1.1.39 ec:1.1.1.37 ec:1.14.16.4 ec:4.1.2.13 ec:1.1.1.25 ec:2.7.1.71 ec:1.3.5.1 ec:4.1.3.27 ec:2.7.2.3	4/6	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:4.2.1.11
Biosynthesis of phenylpropanoids	GIF	22/31	ec:4.2.1.3 ec:1.2.4.2 ec:2.5.1.54 ec:2.6.1.1 ec:2.5.1.19 ec:4.2.1.20 ec:6.2.1.5 ec:6.2.1.4 ec:4.2.3.4 ec:5.4.2.1 ec:2.2.1.1 ec:2.3.1.12 ec:2.4.2.18 ec:1.2.1.12 ec:1.1.1.42 ec:1.1.1.37 ec:4.1.2.13 ec:1.1.1.25 ec:2.7.1.71 ec:1.3.5.1 ec:4.1.3.27 ec:2.7.2.3	4/6	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:4.2.1.11
Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	GIF	21/28	ec:5.1.1.7 ec:4.2.1.3 ec:1.2.4.2 ec:2.6.1.1 ec:4.2.1.52 ec:2.3.1.1 ec:6.2.1.5 ec:6.2.1.4 ec:5.4.2.1 ec:2.3.1.35 ec:1.2.1.38 ec:2.3.1.12 ec:1.2.1.12 ec:1.1.1.42 ec:1.1.1.40 ec:1.1.1.39 ec:1.1.1.37 ec:4.1.2.13 ec:1.3.5.1 ec:2.7.2.4 ec:2.7.2.3	4/6	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:4.2.1.11
Biosynthesis of alkaloids derived from terpenoid and polyketide	GIF	20/30	ec:4.2.1.3 ec:1.2.4.2 ec:2.5.1.29 ec:2.5.1.1 ec:2.5.1.10 ec:6.2.1.5 ec:6.2.1.4 ec:5.4.2.1 ec:4.1.1.33 ec:2.3.1.12 ec:1.2.1.12 ec:1.1.1.42 ec:1.1.1.40 ec:1.1.1.39 ec:1.1.1.37 ec:4.1.2.13 ec:2.7.7.60 ec:1.3.5.1 ec:2.7.2.3 ec:4.6.1.12	4/6	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:4.2.1.11
Biosynthesis of terpenoids and steroids	GIF	20/30	ec:4.2.1.3 ec:1.2.4.2 ec:2.5.1.29 ec:2.5.1.1 ec:2.5.1.10 ec:6.2.1.5 ec:6.2.1.4 ec:5.4.2.1 ec:4.1.1.33 ec:2.3.1.12 ec:1.2.1.12 ec:1.1.1.42 ec:1.1.1.40 ec:1.1.1.39 ec:1.1.1.37 ec:4.1.2.13 ec:2.7.7.60 ec:1.3.5.1 ec:2.7.2.3 ec:4.6.1.12	4/6	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:4.2.1.11
Purine metabolism	GIF	21/50	ec:2.7.1.25 ec:2.4.2.1 ec:6.3.2.6 ec:3.5.4.10 ec:2.1.2.3 ec:2.7.4.8 ec:2.7.4.6 ec:2.7.4.3 ec:5.4.2.2 ec:3.6.1.15 ec:4.1.1.21 ec:2.7.7.8 ec:2.7.7.7 ec:2.7.7.6 ec:2.7.7.4 ec:6.3.4.4 ec:4.6.1.1 ec:3.1.4.17 ec:1.1.1.205 ec:2.7.7.48 ec:2.7.6.1	—-/—-	—-
Aminoacyl-tRNA biosynthesis	GIF	14/28	ec:6.1.1.20 ec:2.1.2.9 ec:6.1.1.19 ec:6.1.1.17 ec:6.1.1.16 ec:6.1.1.15 ec:6.1.1.14 ec:6.1.1.12 ec:6.3.5.7 ec:6.1.1.9 ec:6.1.1.7 ec:6.1.1.5 ec:6.1.1.4 ec:6.1.1.3	2/2	ec:6.1.1.17 ec:6.1.1.15
Citrate cycle (TCA cycle)	GIF	10/18	ec:4.2.1.3 ec:1.2.4.2 ec:6.4.1.1 ec:6.2.1.5 ec:6.2.1.4 ec:4.1.1.49 ec:2.3.1.12 ec:1.1.1.42 ec:1.1.1.37 ec:1.3.5.1	4/6	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5 ec:4.1.3.6
Porphyrin and chlorophyll metabolism	GIF	12/16	ec:1.3.1.76 ec:6.1.1.17 ec:4.2.1.24 ec:1.2.1.70 ec:2.4.1.17 ec:2.4.2.21 ec:4.99.1.4 ec:4.99.1.1 ec:6.3.5.10 ec:2.1.1.130 ec:5.4.1.2 ec:2.1.1.107	2/2	ec:2.4.1.17 ec:6.1.1.17
Fatty acid metabolism	GIF	13/32	ec:1.1.1.1 ec:1.3.99.3 ec:1.3.99.2 ec:6.2.1.20 ec:4.2.1.74 ec:1.3.3.6 ec:2.3.1.9 ec:4.2.1.17 ec:1.3.99.13 ec:2.3.1.16 ec:1.1.1.35 ec:1.1.1.211 ec:1.2.1.3	—-/—-	—-
Glycolysis / Gluconeogenesis	GIF	12/20	ec:1.1.1.1 ec:5.1.3.15 ec:4.1.1.49 ec:5.4.2.2 ec:5.4.2.1 ec:2.3.1.12 ec:1.2.1.12 ec:4.1.2.13 ec:2.7.1.69 ec:2.7.2.3 ec:1.2.1.5 ec:1.2.1.3	1/1	ec:4.2.1.11
Amino sugar and nucleotide sugar metabolism	GIF	10/15	ec:3.2.1.55 ec:3.2.1.14 ec:4.2.1.76 ec:2.5.1.7 ec:5.1.3.14 ec:4.2.1.47 ec:5.1.3.6 ec:5.4.2.2 ec:4.1.1.35 ec:2.7.1.69	1/1	ec:2.7.7.12
Arginine and proline metabolism	GIF	11/18	ec:2.6.1.21 ec:3.5.1.4 ec:2.7.2.11 ec:2.6.1.1 ec:2.3.1.1 ec:2.3.1.35 ec:1.2.1.41 ec:1.2.1.38 ec:4.3.2.1 ec:1.5.1.2 ec:1.2.1.3	—-/—-	—-
Propanoate metabolism	GIF	10/27	ec:1.3.99.3 ec:5.4.99.2 ec:6.4.1.3 ec:6.4.1.2 ec:2.3.1.9 ec:4.2.1.17 ec:6.2.1.5 ec:6.2.1.4 ec:1.2.1.3 ec:2.3.3.5	1/1	ec:6.2.1.5
Pyrimidine metabolism	GIF	11/18	ec:2.7.1.21 ec:2.4.2.9 ec:2.4.2.1 ec:1.3.3.1 ec:2.7.4.9 ec:2.7.4.6 ec:3.6.1.23 ec:2.7.7.8 ec:2.7.7.7 ec:2.7.7.6 ec:2.1.1.45	—-/—-	—-
Pyruvate metabolism	GIF	11/27	ec:6.4.1.2 ec:6.4.1.1 ec:2.3.1.9 ec:4.1.1.49 ec:2.3.1.12 ec:1.1.1.40 ec:1.1.2.3 ec:1.1.1.39 ec:1.1.1.37 ec:1.1.1.21 ec:1.2.1.3	—-/—-	—-
Phenylalanine, tyrosine and tryptophan biosynthesis	GIF	10/14	ec:2.5.1.54 ec:2.6.1.1 ec:2.5.1.19 ec:4.2.1.20 ec:4.2.3.4 ec:2.4.2.18 ec:1.14.16.1 ec:1.1.1.25 ec:2.7.1.71 ec:4.1.3.27	—-/—-	—-
Tryptophan metabolism	GIF	10/20	ec:1.2.4.2 ec:3.5.1.4 ec:2.3.1.9 ec:4.2.1.17 ec:1.11.1.6 ec:1.1.1.191 ec:1.1.1.190 ec:1.14.16.4 ec:1.1.1.35 ec:1.2.1.3	—-/—-	—-
Valine, leucine and isoleucine degradation	GIF	10/26	ec:1.3.99.3 ec:1.3.99.2 ec:5.4.99.2 ec:6.4.1.3 ec:2.3.1.9 ec:4.2.1.17 ec:2.3.1.16 ec:1.1.1.35 ec:1.1.1.31 ec:1.2.1.3	—-/—-	—-
Carbon fixation in photosynthetic organisms	GIF	9/12	ec:2.6.1.1 ec:4.1.1.49 ec:2.2.1.1 ec:1.1.1.40 ec:1.1.1.39 ec:1.1.1.37 ec:4.1.2.13 ec:5.3.1.6 ec:2.7.2.3	—-/—-	—-
Methane metabolism	GIF	7/16	ec:2.6.1.52 ec:5.4.2.1 ec:1.11.1.6 ec:1.2.1.46 ec:1.1.1.37 ec:4.1.2.13 ec:3.6.3.14	2/7	ec:3.6.3.14 ec:4.2.1.11
Oxidative phosphorylation	GIF	7/21	ec:1.10.2.2 ec:3.6.3.6 ec:1.6.5.3 ec:1.6.99.3 ec:1.3.5.1 ec:3.6.3.14 ec:1.9.3.1	2/11	ec:3.6.3.14 ec:3.6.3.6
Starch and sucrose metabolism	GIF	8/9	ec:3.2.1.4 ec:5.1.3.6 ec:2.4.1.17 ec:2.4.1.15 ec:5.4.2.2 ec:4.1.1.35 ec:3.1.3.12 ec:2.7.1.69	1/1	ec:2.4.1.17
Butanoate metabolism	GIF	8/14	ec:1.3.99.2 ec:2.3.1.9 ec:1.1.99.2 ec:4.2.1.17 ec:2.2.1.6 ec:4.1.1.15 ec:1.1.1.36 ec:1.1.1.35	—-/—-	—-
Steroid hormone biosynthesis	GIF	7/8	ec:3.1.6.1 ec:2.4.1.17 ec:1.1.1.63 ec:1.1.1.62 ec:1.1.1.50 ec:1.1.1.239 ec:1.1.1.149	1/1	ec:2.4.1.17
Cysteine and methionine metabolism	GIF	7/14	ec:2.5.1.47 ec:2.6.1.1 ec:4.2.1.22 ec:4.4.1.1 ec:2.1.1.13 ec:2.1.1.10 ec:2.7.2.4	—-/—-	—-
Glycerolipid metabolism	GIF	6/11	ec:2.7.1.30 ec:3.2.1.22 ec:2.3.1.51 ec:2.3.1.15 ec:1.1.1.21 ec:1.2.1.3	1/1	ec:3.1.1.3
Glycine, serine and threonine metabolism	GIF	7/13	ec:1.1.1.1 ec:2.6.1.52 ec:2.1.2.10 ec:4.2.1.22 ec:4.2.1.20 ec:4.4.1.1 ec:2.7.2.4	—-/—-	—-
Pentose phosphate pathway	GIF	7/9	ec:3.1.1.31 ec:5.4.2.2 ec:2.2.1.1 ec:1.1.1.44 ec:4.1.2.13 ec:5.3.1.6 ec:2.7.6.1	—-/—-	—-
Phenylalanine metabolism	GIF	7/12	ec:2.6.1.21 ec:3.5.1.4 ec:2.6.1.1 ec:2.3.1.13 ec:1.14.16.1 ec:4.1.3.39 ec:1.2.1.5	—-/—-	—-
Reductive carboxylate cycle (CO2 fixation)	GIF	4/7	ec:4.2.1.3 ec:6.2.1.5 ec:1.1.1.42 ec:1.1.1.37	3/5	ec:4.2.1.3 ec:2.3.3.8 ec:6.2.1.5
Terpenoid backbone biosynthesis	GIF	7/13	ec:2.5.1.29 ec:2.5.1.1 ec:2.5.1.10 ec:2.3.1.9 ec:4.1.1.33 ec:2.7.7.60 ec:4.6.1.12	—-/—-	—-
Benzoate degradation	GIF	6/15	ec:2.3.1.9 ec:4.2.1.17 ec:1.3.99.15 ec:2.3.1.16 ec:2.3.1.174 ec:4.1.3.39	—-/—-	—-
Glutathione metabolism	GIF	6/11	ec:1.11.1.15 ec:6.3.2.3 ec:2.5.1.18 ec:1.11.1.9 ec:1.1.1.44 ec:1.1.1.42	—-/—-	—-
Glycerophospholipid metabolism	GIF	6/8	ec:1.1.1.8 ec:2.7.7.14 ec:2.3.1.51 ec:3.1.1.4 ec:2.3.1.40 ec:2.3.1.15	—-/—-	—-
Lysine degradation	GIF	6/16	ec:2.6.1.21 ec:1.2.4.2 ec:2.3.1.9 ec:4.2.1.17 ec:1.1.1.35 ec:1.2.1.3	—-/—-	—-
Metabolism of xenobiotics by cytochrome P450	GIF	5/10	ec:1.1.1.1 ec:2.5.1.18 ec:2.4.1.17 ec:1.3.1.20 ec:1.2.1.5	1/1	ec:2.4.1.17
One carbon pool by folate	GIF	6/9	ec:2.1.2.10 ec:1.5.1.15 ec:2.1.2.9 ec:2.1.2.3 ec:2.1.1.45 ec:2.1.1.13	—-/—-	—-
Drug metabolism - cytochrome P450	GIF	4/9	ec:1.1.1.1 ec:2.5.1.18 ec:2.4.1.17 ec:1.2.1.5	1/1	ec:2.4.1.17
Drug metabolism - other enzymes	GIF	4/5	ec:2.7.1.21 ec:2.4.1.17 ec:3.1.1.1 ec:1.1.1.205	1/1	ec:2.4.1.17
Fatty acid elongation in mitochondria	GIF	5/12	ec:4.2.1.74 ec:4.2.1.17 ec:2.3.1.16 ec:1.1.1.35 ec:1.1.1.211	—-/—-	—-
Galactose metabolism	GIF	4/6	ec:3.2.1.22 ec:5.4.2.2 ec:1.1.1.21 ec:2.7.1.69	1/1	ec:2.7.7.12
Selenoamino acid metabolism	GIF	5/14	ec:2.7.1.25 ec:2.5.1.47 ec:4.2.1.22 ec:2.7.7.4 ec:4.4.1.1	—-/—-	—-
Thiamine metabolism	GIF	5/19	ec:2.8.1.7 ec:2.5.1.3 ec:2.7.4.7 ec:3.6.1.15 ec:2.7.1.49	—-/—-	—-
Valine, leucine and isoleucine biosynthesis	GIF	5/6	ec:4.2.1.33 ec:2.2.1.6 ec:6.1.1.9 ec:6.1.1.5 ec:6.1.1.4	—-/—-	—-
Alanine, aspartate and glutamate metabolism	GIF	4/6	ec:2.6.1.1 ec:4.1.1.15 ec:6.3.4.4 ec:4.3.2.1	—-/—-	—-
Ascorbate and aldarate metabolism	GIF	3/7	ec:2.4.1.17 ec:2.7.1.69 ec:1.2.1.3	1/1	ec:2.4.1.17
Biosynthesis of unsaturated fatty acids	GIF	4/10	ec:1.3.3.6 ec:4.2.1.17 ec:2.3.1.16 ec:1.1.1.211	—-/—-	—-
Fatty acid biosynthesis	GIF	4/12	ec:6.4.1.2 ec:2.3.1.41 ec:6.3.4.14 ec:1.3.1.9	—-/—-	—-
Fructose and mannose metabolism	GIF	4/7	ec:4.2.1.47 ec:4.1.2.13 ec:1.1.1.21 ec:2.7.1.69	—-/—-	—-
Pentose and glucuronate interconversions	GIF	3/7	ec:2.4.1.17 ec:1.1.1.21 ec:1.2.1.3	1/1	ec:2.4.1.17
Retinol metabolism	GIF	3/6	ec:1.1.1.1 ec:2.4.1.17 ec:1.2.1.36	1/1	ec:2.4.1.17
Riboflavin metabolism	GIF	4/4	ec:3.5.4.26 ec:2.5.1.9 ec:2.4.2.21 ec:1.1.1.193	—-/—-	—-
Tyrosine metabolism	GIF	4/9	ec:1.1.1.1 ec:2.6.1.1 ec:1.14.16.2 ec:1.2.1.5	—-/—-	—-
alpha-Linolenic acid metabolism	GIF	4/11	ec:1.3.3.6 ec:3.1.1.4 ec:4.2.1.17 ec:2.3.1.16	—-/—-	—-
beta-Alanine metabolism	GIF	4/12	ec:1.3.99.3 ec:4.2.1.17 ec:4.1.1.15 ec:1.2.1.3	—-/—-	—-
Aminobenzoate degradation	GIF	3/6	ec:3.5.1.4 ec:4.2.1.17 ec:3.1.8.1	—-/—-	—-
C5-Branched dibasic acid metabolism	GIF	2/3	ec:6.2.1.5 ec:2.2.1.6	1/1	ec:6.2.1.5
Chloroalkane and chloroalkene degradation	GIF	3/8	ec:1.1.1.1 ec:1.2.1.46 ec:1.2.1.3	—-/—-	—-
Geraniol degradation	GIF	3/10	ec:4.2.1.17 ec:2.3.1.16 ec:1.1.1.35	—-/—-	—-
Glyoxylate and dicarboxylate metabolism	GIF	2/3	ec:4.2.1.3 ec:1.1.1.37	1/3	ec:4.2.1.3
Histidine metabolism	GIF	3/10	ec:5.3.1.16 ec:1.2.1.5 ec:1.2.1.3	—-/—-	—-
Limonene and pinene degradation	GIF	3/9	ec:4.2.1.17 ec:1.14.13.48 ec:1.2.1.3	—-/—-	—-
Lysine biosynthesis	GIF	3/3	ec:5.1.1.7 ec:4.2.1.52 ec:2.7.2.4	—-/—-	—-
Nicotinate and nicotinamide metabolism	GIF	3/3	ec:2.7.1.23 ec:2.4.2.1 ec:1.4.1.21	—-/—-	—-
Nitrogen metabolism	GIF	3/3	ec:4.2.1.1 ec:2.1.2.10 ec:4.4.1.1	—-/—-	—-
Other types of O-glycan biosynthesis	GIF	2/2	ec:2.4.1.17 ec:2.4.1.109	1/1	ec:2.4.1.17
Sphingolipid metabolism	GIF	3/3	ec:3.2.1.22 ec:3.1.6.1 ec:2.3.1.50	—-/—-	—-
Streptomycin biosynthesis	GIF	3/3	ec:4.2.1.46 ec:5.4.2.2 ec:3.1.3.25	—-/—-	—-
Sulfur metabolism	GIF	3/9	ec:2.7.1.25 ec:2.5.1.47 ec:2.7.7.4	—-/—-	—-
Vitamin B6 metabolism	GIF	3/3	ec:2.7.1.35 ec:2.6.1.52 ec:1.1.1.262	—-/—-	—-
mTOR signaling pathway	GIF	2/3	ec:2.7.11.24 ec:2.7.11.11	1/1	ec:2.7.11.11
Arachidonic acid metabolism	GIF	2/4	ec:3.1.1.4 ec:1.11.1.9	—-/—-	—-
Caprolactam degradation	GIF	2/6	ec:4.2.1.17 ec:1.1.1.35	—-/—-	—-
Ethylbenzene degradation	GIF	2/6	ec:2.3.1.16 ec:4.1.3.39	—-/—-	—-
Glycosphingolipid biosynthesis - globo series	GIF	2/2	ec:3.2.1.49 ec:3.2.1.22	—-/—-	—-
Isoquinoline alkaloid biosynthesis	GIF	2/3	ec:2.6.1.1 ec:1.14.16.2	—-/—-	—-
Lipopolysaccharide biosynthesis	GIF	2/2	ec:2.4.1.182 ec:2.7.7.38	—-/—-	—-
Monoterpenoid biosynthesis	GIF	2/2	ec:1.14.13.48 ec:1.14.13.47	—-/—-	—-
Pantothenate and CoA biosynthesis	GIF	2/2	ec:2.1.2.11 ec:2.2.1.6	—-/—-	—-
Photosynthesis	GIF	1/9	ec:3.6.3.14	1/6	ec:3.6.3.14
Primary bile acid biosynthesis	GIF	2/3	ec:1.1.1.50 ec:1.1.1.35	—-/—-	—-
Steroid biosynthesis	GIF	1/1	ec:2.3.1.26	1/1	ec:3.1.1.13
Styrene degradation	GIF	2/3	ec:3.5.1.4 ec:4.1.3.39	—-/—-	—-
T cell receptor signaling pathway	GIF	2/4	ec:3.1.3.16 ec:2.7.10.2	—-/—-	—-
Tropane, piperidine and pyridine alkaloid biosynthesis	GIF	2/3	ec:2.6.1.1 ec:3.1.1.1	—-/—-	—-
Atrazine degradation	GIF	1/1	ec:4.2.1.69	—-/—-	—-
Biosynthesis of ansamycins	GIF	1/1	ec:2.2.1.1	—-/—-	—-
Biosynthesis of vancomycin group antibiotics	GIF	1/1	ec:4.2.1.46	—-/—-	—-
Bisphenol degradation	GIF	1/1	ec:3.1.1.2	—-/—-	—-
Cyanoamino acid metabolism	GIF	1/1	ec:3.5.1.4	—-/—-	—-
D-Alanine metabolism	GIF	1/2	ec:2.6.1.21	—-/—-	—-
D-Arginine and D-ornithine metabolism	GIF	1/2	ec:2.6.1.21	—-/—-	—-
D-Glutamine and D-glutamate metabolism	GIF	1/1	ec:5.1.1.3	—-/—-	—-
Dioxin degradation	GIF	1/2	ec:4.1.3.39	—-/—-	—-
Ether lipid metabolism	GIF	1/2	ec:3.1.1.4	—-/—-	—-
Folate biosynthesis	GIF	1/3	ec:3.5.4.16	—-/—-	—-
Inositol phosphate metabolism	GIF	1/1	ec:3.1.3.25	—-/—-	—-
Linoleic acid metabolism	GIF	1/2	ec:3.1.1.4	—-/—-	—-
Lipoic acid metabolism	GIF	1/3	ec:2.8.1.8	—-/—-	—-
N-Glycan biosynthesis	GIF	1/1	ec:2.4.1.83	—-/—-	—-
Naphthalene degradation	GIF	1/3	ec:1.1.1.1	—-/—-	—-
Novobiocin biosynthesis	GIF	1/2	ec:2.6.1.1	—-/—-	—-
Peptidoglycan biosynthesis	GIF	1/2	ec:2.5.1.7	—-/—-	—-
Phosphatidylinositol signaling system	GIF	1/1	ec:3.1.3.25	—-/—-	—-
Phosphonate and phosphinate metabolism	GIF	1/1	ec:2.7.7.14	—-/—-	—-
Polyketide sugar unit biosynthesis	GIF	1/1	ec:4.2.1.46	—-/—-	—-
Synthesis and degradation of ketone bodies	GIF	1/3	ec:2.3.1.9	—-/—-	—-
Taurine and hypotaurine metabolism	GIF	1/1	ec:4.1.1.15	—-/—-	—-
Tetracycline biosynthesis	GIF	1/6	ec:6.4.1.2	—-/—-	—-
Toluene degradation	GIF	1/2	ec:1.1.1.35	—-/—-	—-
Ubiquinone and other terpenoid-quinone biosynthesis	GIF	1/1	ec:2.1.1.64	—-/—-	—-
Xylene degradation	GIF	1/2	ec:4.1.3.39	—-/—-	—-