454 Reads

454 reads were sequenced at Amplicon Express, see Coscinasterias transcriptome web materials for further information. They were mapped over the SOAPdenovo-Trans transcripts using BOWTIE2, then processed with SAMTOOLS to convert alignments in SAM format into sorted BAM, as well as to extract the PILEUP file for the coverage graph.
You can get further details about the reads by clicking on them, such action will open a details page showing mapping coords info, the alignment of the read and the contig, as well as the fasta sequence for the read at the bottom.